PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21818.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CPP

Protein Properties

Length: 798aa MW: 86735.5 Da PI: 6.2529

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.1	2.8e-16	497	535	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C C+dC+Nk PHU21818.1 497 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCACQDCFNKP 535 589**********************************96 PP
2	TCR	51.1	2.7e-16	582	620	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN PHU21818.1 582 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 620 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MSTKEREEDD KVSLESENVE KKSEVKGGVV VIMDTPERNK NQIATPISKF EESPFSNFLN 60 NLSPIKPVKS AHFPQSLNTL SFGSIPSVFT SPHVSSVRES RFLRRHLLSD PSKPEFASDD 120 SAKADADEGM LDGVNNSNDA KESFGSEISV VEALATPSHG SKLAVELSRT LNYDSPSTLP 180 TGNMRGKSLA EFTGSSVTYI PLVQDMSGKG LVRCEVNMEG TNEIDPNKEA SGCDWENLIC 240 DATDLLIFDS PGDPEAFTKA TGPHFRPFGF VSKEMQNMQG SSQVSTSECG GDGSETENPS 300 TQPADETQVK EYAETQNVKP DSSLTNDGMG AGQSEKTDNE MVSTLYRGMR RRCLVFEMVG 360 SRRKHVDEGS GSSAVQDTDG NLACNEKQLV PYKTVNESSR CILPGIGLHL NALAASSKDG 420 KVVKHETSAS GKQLLITSGS AVSHHPSVTG QESLKKEACP FLSLMIIFCS CNLFSLYLYV 480 ITNCFCRRRL EPGEGEACKR CNCKKSKCLK LYCECFAAGV YCVEPCACQD CFNKPIHEDT 540 VLATRKQIES RNPLAFAPKV IRSADSVSET GDDSSKTPAS ARHKRGCNCK KSGCLKKYCE 600 CYQGGVGCSI NCRCEGCKNA FGRKDGSVFI GTDGDAEEEE TTEAFEKSIV DRTSHKNILH 660 SDVEQNPDFI VPATPLAFRR PPMQLPLSLK NKPPRSSFLC IGSSSGLFAG QGVVGRPDFF 720 PPQPKFEKPF ESIQEDEMPE ILQQGGTSSP ISGIKTASPN RKRVSPPHCD FANSPGRRSS 780 RKLILQSIPS FPSLTPNP

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MSTKEREEDD KVSLESENVE KKSEVKGGVV VIMDTPERNK NQIATPISKF EESPFSNFLN  60
NLSPIKPVKS AHFPQSLNTL SFGSIPSVFT SPHVSSVRES RFLRRHLLSD PSKPEFASDD  120
SAKADADEGM LDGVNNSNDA KESFGSEISV VEALATPSHG SKLAVELSRT LNYDSPSTLP  180
TGNMRGKSLA EFTGSSVTYI PLVQDMSGKG LVRCEVNMEG TNEIDPNKEA SGCDWENLIC  240
DATDLLIFDS PGDPEAFTKA TGPHFRPFGF VSKEMQNMQG SSQVSTSECG GDGSETENPS  300
TQPADETQVK EYAETQNVKP DSSLTNDGMG AGQSEKTDNE MVSTLYRGMR RRCLVFEMVG  360
SRRKHVDEGS GSSAVQDTDG NLACNEKQLV PYKTVNESSR CILPGIGLHL NALAASSKDG  420
KVVKHETSAS GKQLLITSGS AVSHHPSVTG QESLKKEACP FLSLMIIFCS CNLFSLYLYV  480
ITNCFCRRRL EPGEGEACKR CNCKKSKCLK LYCECFAAGV YCVEPCACQD CFNKPIHEDT  540
VLATRKQIES RNPLAFAPKV IRSADSVSET GDDSSKTPAS ARHKRGCNCK KSGCLKKYCE  600
CYQGGVGCSI NCRCEGCKNA FGRKDGSVFI GTDGDAEEEE TTEAFEKSIV DRTSHKNILH  660
SDVEQNPDFI VPATPLAFRR PPMQLPLSLK NKPPRSSFLC IGSSSGLFAG QGVVGRPDFF  720
PPQPKFEKPF ESIQEDEMPE ILQQGGTSSP ISGIKTASPN RKRVSPPHCD FANSPGRRSS  780
RKLILQSIPS FPSLTPNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-154	CPP family protein