PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21718.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 212aa    MW: 23820.6 Da    PI: 6.775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-1981131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  PHU21718.1  81 SYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 131
                 69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDSTPSSCSS HFFYPMNSDL YSSDSSLPFN VDDSEEMLLY GVLQETTSET VTSYPVVKEE  60
EVNSESEVVS QVESKPGKKK SYRGVRRRPW GKFAAEIRDS TRNGVRVWLG TFDSAEAAAL  120
AYDQAAFSMR GTSAILNFPV ETVRESLRDM KCHIDQDCSP VVALKKRHSM RKRNTTSSSK  180
KCNSNSNNNN NKVMREVKME NVNNVVVFED LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-48ERF family protein