PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 402aa MW: 44026.6 Da PI: 6.5142 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 81.7 | 6.3e-26 | 142 | 207 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++g+++ln+ a+ L +v +RRiYDi+NVLe+++liek+ k++irwkg PHU20946.1 142 RYDNSLGLLTKKFINLLQEADDGTLDLNHSADVL---EV--AKRRIYDITNVLEGIGLIEKTTKSHIRWKG 207 689*******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MSTTAASDNV DLNLSLGAAA ATLHHNSPSA SALAAAASRS HRSLFSNIPR ICSESVSFSG 60 NPLASSTFLF APKNEIEKPG EYNCVYGAGK KSLAVNYSPL KQATSARTKQ PSKGKVSRDA 120 VSAAKGVNAD LLDNLNLGGH YRYDNSLGLL TKKFINLLQE ADDGTLDLNH SADVLEVAKR 180 RIYDITNVLE GIGLIEKTTK SHIRWKGFRS TKSRGLDNQV SRLKGEIAYL NAEDCRLDNC 240 IREKLEQIRT LESDMDSQKS LFLTEEDIMS LPRFRDKTVI AIKAPYASSI EVPDPCEDLD 300 LERQYRLVLR STTAPIDLFL LSKPGRQHED LTIKHEKPLD ALSAAEKTDD AYLSSVRPCS 360 LDSTASKLSG VHKIVPSHAC VDDDYWLLSE EEVSATALWG AQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G47870.1 | 7e-79 | E2F/DP family protein |