PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 223aa MW: 22893.2 Da PI: 6.7396 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.3 | 3.9e-39 | 25 | 83 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rkn ++ PHU20864.1 25 PENLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNVPVGGGTRKNSSH 83 57899**************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MSSEIGDRRP ARLPAPVNGT RPSEPENLPC PRCDSTNTKF CYYNNYNLSQ PRHFCKSCRR 60 YWTRGGTLRN VPVGGGTRKN SSHKRPRTTT GAAVQEHTNP GLGSGSGSVS LMGCEVNLNE 120 SVQEGGGNGT ASFTSLLTAG PVGGGFGPLG GFGLGLSGFG LGNLDWPMEQ VVVGGVGGNG 180 GDGGENDKWQ LSGGEVEGGG GGGDDDCFGW PDLAISAPGT SLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 2e-34 | Dof family protein |