PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20862.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 579aa    MW: 64562.1 Da    PI: 7.5321
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.3e-181599999
                HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                ++l+   l +p kf++++++    s t +l  +sg+sW v l   +++++ ++ +GW +Fvk++ +++gD++vF+  ++ + +++v+vf++
  PHU20862.1 15 SSLNYEKLKVPSKFTKHIEER--ASGTAVLVGPSGNSWHVDL--IQQDDGLFFHNGWASFVKDHCIEAGDSLVFR--DDGDLHFTVQVFDE 99
                455667799******877744..5669***************..99999**************************..44777789**9986 PP
2B352.68.3e-17252346198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f kv+++ + + s  l +p +fa+e+   +++++++ l +++g++W+v+ i  ++ + ++++ +GW +Fv++n+++ gD+++F+l+++ e   +v+v+r
  PHU20862.1 252 FTKVMKRFNISGSYTLHIPYQFATEYL--PNCKVKILLHNLKGKTWTVNSIPtTRVQTSHTFCGGWLSFVRENNIDLGDICIFELVRECEL--RVRVLR 346
                 677777777788889***********6..45999****************77566666699************************985555..888877 PP
3B348.31.8e-15469563198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+ ++++ +v+ s  l +p +f  eh   +++ ++++l +++g+ W+v+ i + k ++ +++ +GW+ Fv++n+++ gD+++F+l+g  + e++v+++ 
  PHU20862.1 469 FVRIMKKFNVSGSYTLKVPYRFSMEHL--PNCRTEIVLHNLKGECWTVNSIPTVKVQTlHTFCGGWSAFVRENDIQMGDICIFELIG--KYEMRVHICA 563
                 556677778888999*******99996..45889****************99888888999************************99..5667899985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MCESRKPHFL VGFNSSLNYE KLKVPSKFTK HIEERASGTA VLVGPSGNSW HVDLIQQDDG  60
LFFHNGWASF VKDHCIEAGD SLVFRDDGDL HFTVQVFDES SCEKEAAYNA DCSQGATNLY  120
NLALKKRDRG NSVLLDCIVE GVPKKMRSTQ NPSECTSSQD THELAFSKDG YTPEDAGRDY  180
VASFLDEMEN AGDALDNTVT IAVPSQAMVV FHNPESKAEV KIGSGTSEED MWLPAQEAEK  240
VARLFTSSFP SFTKVMKRFN ISGSYTLHIP YQFATEYLPN CKVKILLHNL KGKTWTVNSI  300
PTTRVQTSHT FCGGWLSFVR ENNIDLGDIC IFELVRECEL RVRVLRVERE GNGYSSKAVH  360
EGLAADYAKI SGSKSRKVGA NSNHCSQQVV KAMKYDKKGS NHDKGHHGNM LKNHQLHCQS  420
KISSGDSAIR KPTSSQDKQG SFTKSCMSMK SVPEEKLAAE SFVSNFPRFV RIMKKFNVSG  480
SYTLKVPYRF SMEHLPNCRT EIVLHNLKGE CWTVNSIPTV KVQTLHTFCG GWSAFVREND  540
IQMGDICIFE LIGKYEMRVH ICANGVIADQ SAIVVSLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-18B3 family protein