PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20821.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 818aa MW: 92061 Da PI: 7.1915

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.9e-09	479	516	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps++++ L++++gL+++qV++WF N R + PHU20821.1 479 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 516 554459******************************88 PP
2	BELL	104.8	5.9e-34	339	410	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er e q++k kLls+l+e + rY +y+eq+q++++sF+ v+g+g+a+pYt+lA+ka+SrhFrc+kdai+ q+ PHU20821.1 339 ERSEYQRRKIKLLSMLDEAYARYTRYCEQMQAMVNSFDSVIGYGAAAPYTALAQKAMSRHFRCIKDAIVAQL 410 789******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MSQSFHHQQG FYNFSNVYER SATTTTKHEE MLRVQGFEPQ QVGVAAAVEP SPAGAMVYDD 60 GGMLTEIISY PSAWRKTATE ILDDQIQSSN YRSWTQKEQQ HQHQQQLHPQ SIVNDTELPL 120 MNPHIKPSSP PRASSSLHML LPNSVDTNNL LHHQGFHLLN PATVEPPSQF TWIPGSSSGE 180 DDSTRIGRVV DGQGLSLSLS RNFEAAAKLE DLRIGNGGIY LQNNQGLLSP INNNHQHHHQ 240 LLHSGVVMDH RTTSPHTNVH HQIHVGYAAS SPRISNALRN SRYVKAAQEL LEEFCCVGRG 300 NFKNQRVKKY DDENPNSNSE SEDHRGSSKD NHPPLSAAER SEYQRRKIKL LSMLDEAYAR 360 YTRYCEQMQA MVNSFDSVIG YGAAAPYTAL AQKAMSRHFR CIKDAIVAQL KQTCKYLGEK 420 DVTGTSGLTK GETPRLKVLD QKLRQQKALH QMGMLDSDAW RPQRGLPERS VNVLRAWLFE 480 HFLHPYPSEA DKHLLSRQTG LSKNQVSNWF INARVRLWKP MVEEMYQQET KEEETDQEDD 540 NQDQQQHQQE KQAQIPMHDK TSNMATSSTT TTMPLSSSAR SEFNANERDP SKNIINYRHY 600 ALGNQLVMLQ SDDTATTSSA NPYFMAGDAS GLVAGNSNAA GMAAFGSQQA GDVSLTLGLR 660 HSENIKFHLG VLDLNVALYS EKPTAITKAS SDEEKSYYKH WDWSNRLGLM FMRMNIAGNI 720 KTTLPKTESA KEFLKLVEES SQTADKSLNG TLMGTLTIMK LDGSRTMHEH VIEMTNIAAR 780 LKSLGMKVEH NFLVQFIINS LPSEYGPFQM NYNTMKDK

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MSQSFHHQQG FYNFSNVYER SATTTTKHEE MLRVQGFEPQ QVGVAAAVEP SPAGAMVYDD  60
GGMLTEIISY PSAWRKTATE ILDDQIQSSN YRSWTQKEQQ HQHQQQLHPQ SIVNDTELPL  120
MNPHIKPSSP PRASSSLHML LPNSVDTNNL LHHQGFHLLN PATVEPPSQF TWIPGSSSGE  180
DDSTRIGRVV DGQGLSLSLS RNFEAAAKLE DLRIGNGGIY LQNNQGLLSP INNNHQHHHQ  240
LLHSGVVMDH RTTSPHTNVH HQIHVGYAAS SPRISNALRN SRYVKAAQEL LEEFCCVGRG  300
NFKNQRVKKY DDENPNSNSE SEDHRGSSKD NHPPLSAAER SEYQRRKIKL LSMLDEAYAR  360
YTRYCEQMQA MVNSFDSVIG YGAAAPYTAL AQKAMSRHFR CIKDAIVAQL KQTCKYLGEK  420
DVTGTSGLTK GETPRLKVLD QKLRQQKALH QMGMLDSDAW RPQRGLPERS VNVLRAWLFE  480
HFLHPYPSEA DKHLLSRQTG LSKNQVSNWF INARVRLWKP MVEEMYQQET KEEETDQEDD  540
NQDQQQHQQE KQAQIPMHDK TSNMATSSTT TTMPLSSSAR SEFNANERDP SKNIINYRHY  600
ALGNQLVMLQ SDDTATTSSA NPYFMAGDAS GLVAGNSNAA GMAAFGSQQA GDVSLTLGLR  660
HSENIKFHLG VLDLNVALYS EKPTAITKAS SDEEKSYYKH WDWSNRLGLM FMRMNIAGNI  720
KTTLPKTESA KEFLKLVEES SQTADKSLNG TLMGTLTIMK LDGSRTMHEH VIEMTNIAAR  780
LKSLGMKVEH NFLVQFIINS LPSEYGPFQM NYNTMKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-125	TALE family protein