PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20790.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 248aa    MW: 27495.2 Da    PI: 8.4697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08148188954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHU20790.1 148 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 188
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDIDMLKSAA GCEDQMEMML MMQLDKFPDF TTGNSSELPV MEFSPQGSCN SNNNNYNYHQ  60
LDQNSPNFLN MPSTISFTNS PPIHQNPNFL ANSGAFNSHS MNRSNMAAMR EMIFRIAAMQ  120
PINIDPESVK PPKRRNVKIS TDPQSVAARH RRERISERIR ILQRLVPGGT KMDTASMLDE  180
AIHYVKFLKN QVQSLERAGA NRPSNGTAAA AAAAAGLGFP VPMSLSGNYN LPVSTKSCYQ  240
NIQQYADV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.19e-42bHLH family protein