PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20643.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 330aa    MW: 36756.2 Da    PI: 8.5733
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.9e-1587138155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  PHU20643.1  87 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 138
                 57****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNFFVMYLLV GGYAILINSV YLGGYDMEDK AARAYDQAAL KYWGPSTHIN FPLENYQKEL  60
EEMKHMTRQE YVAHLRRKSS GFSRGASIYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS  120
TQEEAAEAYD VAAIKFRGVN AVTNFDISRY DVEKIMASNT LPAGELARRT KEREPRESIE  180
YNNISVHKNE ECVQNNNNNG NITDWKMVLY QASNPSIGSN NYRNPSFSVA LQDLIGIDSI  240
NNSTSHATIL DHEQNKIGAN HFSNASSLVT SLGSSREASP DKTAASLVFA KPTKFVVPST  300
NVNACIPSAQ LRPIPVSMAH LPVFATLNDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.12e-95AP2 family protein