PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU20034.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 275aa MW: 31061.8 Da PI: 4.1924

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU20034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.2	3.6e-38	21	80	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+a +cprC stntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rk+++s+ PHU20034.1 21 EQAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKSRRSR 80 67789***************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MLPYHSRPMI MMERTRKSNI EQAPNCPRCA STNTKFCYYN NYSLSQPRYF CKACRRYWTK 60 GGSLRNVPVG GGCRKSRRSR SSRKDDNTLQ SPSPAFETPG ANIDLADVFA KYLNQGTAND 120 HDDDDQDNNI ILQESQDYSS IGASLSESPS SDSLVNNPTS FENESLFDET IMASFQDYPC 180 GNFLQEEQGG PIDQVGNQDF LDFNTSFLEM QAMLGDEIIG QGEEFDHYNT SNFSWQSMMQ 240 FQDFGSILEL DDQLKNSTSN LASDNNNYSS FDLSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	8e-37	Dof family protein