PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 201aa MW: 23253 Da PI: 10.1057 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.1 | 4e-13 | 14 | 59 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT++E+ ++++ k++G+g+W+ Ia+ + +Rt q+ s+ qk+ PHU19875.1 14 NPWTEDEQIAFLKGLKLHGKGNWANIAKDFLPNRTSTQIASHSQKH 59 58***************************999**********9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MFRKDYRRKI KKANPWTEDE QIAFLKGLKL HGKGNWANIA KDFLPNRTST QIASHSQKHF 60 MRLDVNSNER KHHKKSSVFD IHLKKIEDIE HAIVPLENNQ ESLHVPIFLP NFNLTKRIQV 120 PKVTPVTWVY MYPYHQYTST SAKLLETIFC FLDFQDIKES PILIRDPVID FFVKGQAVQS 180 APLSSVIKVI GSLDKSIPCP G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 2e-19 | MYB_related family protein |