PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 327aa MW: 37997 Da PI: 5.6553 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 34 | 7e-11 | 251 | 292 | 50 | 91 |
NF-YB 50 asdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 + + r++rk ngd+l+wal+ +Gfedy+eplk yl + r PHU19591.1 251 MQVTSVRKRRKMTNGDNLIWALTIIGFEDYIEPLKGYLIRRR 292 333456899*****************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MTKSTHFLLV RTNFSSEDYA RLYLEEIVKF HEVPISIILD PIGKASKMNY SNIERSQACM 60 IDYSGSWVEH FPLIEFMYNN SYHSSIRMAP FEALYGVVFQ AMQEPAILLF LLFSDLDSGT 120 AFSQIEVDMD FDAIWVCKKG RFCDSIDVFE AMPEKNIESH NAILSLYLGI DDFMSVRKEF 180 DKIDERNIIC WNAMINGYMK DDEEQFDDVA RCRSKLLTCV EKLTRATIKK LTHGMVEHNK 240 AFSAASIISK MQVTSVRKRR KMTNGDNLIW ALTIIGFEDY IEPLKGYLIR RRYALLLRIN 300 DMELLIVFTF DMSLSMPQGL FLMSERH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 2e-09 | NF-YB family protein |