PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU19494.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 216aa MW: 24951 Da PI: 10.007

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU19494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.6	5.9e-05	19	49	10	34
HHHHHHHHHHHHHHHCTSCC.C........T CS HLH 10 rrRRdriNsafeeLrellPk.as.....kap 34 + RR+r+ + fe+L+ llP+ ++ k + PHU19494.1 19 KERRKRMQNMFENLQALLPQlRPkntvnKLK 49 78******************55355555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MQMEMEMEKQ VMRYTYGRKE RRKRMQNMFE NLQALLPQLR PKNTVNKLKE QKLERKQFLA 60 DKGSASNSTA ITRRNIHNNV NVILLLNTNV PTNFVTWSSQ NVVVNVCGEE AHISVCCPKK 120 PRLFSFICHV LEKHKIDIVS AQVSFDKFRS TFMIQTHARD ASGLNQLISG VFSVEDMYKQ 180 AANEIISGVY FFKLNCSWER ESGLVLMLIA DLGKRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	49	RRKRMQNMFENLQALLPQLRPKNTVNKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	2e-19	bHLH family protein