PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 24051.3 Da PI: 8.6647 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.2 | 1.6e-19 | 47 | 100 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++++eq++ Le+ F ++++ +e++ +LA++lgL+ qV vWFqNrRa++k+ PHU19413.1 47 KRKLSEEQVNLLERSFGDEHKLETERKDKLASELGLDPHQVAVWFQNRRARWKN 100 45899***********************************************95 PP | |||||||
2 | HD-ZIP_I/II | 112.6 | 2.5e-36 | 46 | 136 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls+eqv+lLE+sF e+kLe+erK +la+eLgl+p+qvavWFqnrRAR+k+k+lE++y++Lk ++++ e+ rLe+ev +++e+l PHU19413.1 46 RKRKLSEEQVNLLERSFGDEHKLETERKDKLASELGLDPHQVAVWFQNRRARWKNKKLEEEYSKLKIQHETTIIEKYRLETEVLKMKEQLC 136 8**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MILISHQFYP HIYVRLTQDL QEETVKPRRR KNKKREGNNN SSVVVRKRKL SEEQVNLLER 60 SFGDEHKLET ERKDKLASEL GLDPHQVAVW FQNRRARWKN KKLEEEYSKL KIQHETTIIE 120 KYRLETEVLK MKEQLCQAEK QIQRLLFERN CDISSNSPTS SIFSMEQPQF NLGEFGMEGL 180 LMDNNVFFVG DNQSTYATLW DN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 31 | PRRRK |
2 | 28 | 36 | RRRKNKKRE |
3 | 28 | 49 | RRRKNKKREGNNNSSVVVRKRK |
4 | 29 | 50 | RRRKNKKREGNNNSSVVVRKRK |
5 | 33 | 54 | RRRKNKKREGNNNSSVVVRKRK |
6 | 46 | 75 | RKRKLSEEQVNLLERSFGDEHKLETERKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 2e-51 | HD-ZIP family protein |