PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 108aa MW: 11645.9 Da PI: 7.6829 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.3 | 1e-14 | 6 | 52 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ gr+ AeI+ + +lg f+taeeAa a++aa+ +l+g PHU19062.1 6 KYRGVRKRS-GGRYQAEIWI------GYNKHLGMFDTAEEAALAYDAAAIRLRG 52 8*****888.9*********......47889*********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MAEEVKYRGV RKRSGGRYQA EIWIGYNKHL GMFDTAEEAA LAYDAAAIRL RGVNAKTNFP 60 IPSRRSSTGG GGGGVGDTVT VARQSESSSP ESRHIEIDLN LPPPPEDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 1e-11 | ERF family protein |