PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18917.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 130aa    MW: 13751.6 Da    PI: 10.5533
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.13.7e-08311081996
       NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                  ++P+ r+ + lk+ + v+++ a aPv ls   e++  e+   + + a++nk++ ++   i+ av +      l+++v
  PHU18917.1  31 LQFPVGRVARWLKKGKYVERVGAGAPVYLSAVLEYLAAEVLELAGNAAKNNKKKRIEPRHIQLAVRNDAELSKLLENV 108
                 589**************************************99**********************9988887777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MSSTDGSSDS GIGSEKKKAS KSVSRSAKAG LQFPVGRVAR WLKKGKYVER VGAGAPVYLS  60
AVLEYLAAEV LELAGNAAKN NKKKRIEPRH IQLAVRNDAE LSKLLENVTF ASGGGPSNID  120
QDLLPRGSQG