PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18805.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 775aa    MW: 86566.4 Da    PI: 4.3404
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.6e-06310329525
                 --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                 +C ffar G+C  G++C+F H
  PHU18805.1 310 RCEFFAR-GWCIKGNSCRFLH 329
                 5******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
MASSGAAAAD PIPMRDEFEE DEEEEYEEIE VEVEEEIEEE EEVEEEEEEE EEEVQAEEET  60
GEGSIPMNVD DQKEEEEEKG QGSSPLNVAH QKEEAEEEVE AEEEEEVEEE EEEEEEENGK  120
GSSPLSVDGQ KEEEEEEEEV QDEVEKGQGS SPLNVDNQKD GNQILEPLGL EQHLRPAFST  180
QQEPVANLLQ HTPLIKGGND SCRISNSDET RERIDGKRIL INSDVQASGC ECGETNTKRI  240
QPFGQELDAE ILTDVKGKEA VGVQFTEGSD QEAVNDLKQT SRRLDVLKTR QRSLSPAADS  300
RGGSKRLAMR CEFFARGWCI KGNSCRFLHI KEHVTSHEKD GSLDETMMKS KIADDKGLEE  360
NCKTSVLDGS SDSVQSAVRS GENLKLREEL YMRTGGPSST PDIGRESLGF NPYLAAYSAS  420
SSQFLKDGSL HKNSLHHELR HCSSSRKIDA LDDQRLLDSS QEYSSSRSTS LQHKSSAFPS  480
SKARLSQIDL SRDTRHSSDY RTVGSFDDWE PSVPFRPSFL LTQMIGFPES LYDPIRDSID  540
QSNVGDGPSK FSTSGKGGSV LTKHMQTNAD PVSTGTLGPE QSSNKVPISG QIHHRDILPD  600
NLSDKDLPSN ETDTADTAVA HQENMNTSSK EEKLSSSANL KGVTKADKFN LSTELLHSRP  660
RKKTHLESER LRQGNEIDTD WKTDRSVNKE SRVMKQFHAA LVEFVKELLR PTWSEGLMSK  720
DAYKMIVKKT VDKVEHSLHP NQIPNTAESI EEYFDISQPK LAKLIEAYVE KYGKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.18e-29C3H family protein