PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU18588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 147aa MW: 17516 Da PI: 6.0529 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.1 | 4.6e-09 | 6 | 30 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia++++ gRt++++k++w+++l PHU18588.1 6 RWSAIASRLP-GRTDNEIKNFWHTHL 30 4*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MFFFFRWSAI ASRLPGRTDN EIKNFWHTHL KKRLEQHNID LASTTTTKQN HEMTTNVTQN 60 IDHHIISPNY YQDSQNMVTY HPTYCHDHQE DFQENNSSSH DHTQSNKEEI MQYSTNYGHE 120 DMTSFNNDMV FWYNVFMSSG NNPSEIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 3e-16 | MYB family protein |