PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18518.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 297aa MW: 33618.3 Da PI: 9.433

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	77	137	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s PHU18518.1 77 PENALKCPRCASTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRS 137 7899*****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MAFSSIPLYL DPSNWQHEQE NQQQQQLRVT NHEMNYPSEL SPAVLPSPAA TGGGGPAGLV 60 RPGSMTERAR LAKIPQPENA LKCPRCASTN TKFCYYNNYN LSQPRHFCKT CRRYWTRGGA 120 LRNVPVGGGC RRNNKRSSKR SRSTKSPNRS DQRSRNNVPT ISTSTITFPS HLPLPNTSTH 180 LSFLNTPFHN LNDFNSTQND MNFGEIQSHE GDGRFIDQFR LQQMQQFSFF PPLEQQPSNL 240 YPISEFGISH DLENVKVEEN TSSINSQGMN LQRNNTLGVN QFWIDYNISS TSTSQLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-48	Dof family protein