PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18319.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 308aa MW: 34785.6 Da PI: 5.6218

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.5e-33	171	229	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCt+++C vkk+vers +d+++v++tYeg+H+h+ PHU18319.1 171 LDDGYKWRKYGQKAVKNSPFPRSYYRCTTTSCGVKKRVERSIQDTSIVVTTYEGTHTHP 229 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MEKESNLESE YSIEDGNGNL STFVMNNPNM MSNNFDIEKD YSLTFLLENM FGGTHVDHQD 60 YDFITTTTSN SIFDLLMLPP HQPIITTSTV QDSTISDQLI NAPVTPNVSS ISSTSTELPA 120 DDYQQEKKVN QQDGEQDQDK YKKQLKAKRK NQKGKREPRF AFMTKSEIDH LDDGYKWRKY 180 GQKAVKNSPF PRSYYRCTTT SCGVKKRVER SIQDTSIVVT TYEGTHTHPC PVMPRGYAGV 240 HPVTINYGVS IGAGDSGGRT YYGDSSLFST NNLLQERRFW SPSSSLDEDH GLPQDMISSC 300 MGRDLIDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	2e-44	WRKY family protein