PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU18192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 27942.7 Da PI: 9.0523 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.7e-07 | 25 | 64 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 WT+eE +++ a + + +W+++a+ ++ g++ ++ PHU18192.1 25 EWTKEENKKFESALAIYDETtpnRWSKVAEIIP-GKSVLDV 64 7*****************99*************.*998776 PP | |||||||
2 | Myb_DNA-binding | 41.5 | 3e-13 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W+ I+r + +t+ q+ s+ qky PHU18192.1 122 PWTEEEHRRFLMGLEKYGKGDWRNISRNFVISKTPTQVASHAQKY 166 8*****************************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
METLCPTSFV PNSNWTMQQS KSTTEWTKEE NKKFESALAI YDETTPNRWS KVAEIIPGKS 60 VLDVMMQYKE LVADVSDIEA GLVPNPRRFV SSFALEFADH RKIHTFSKRG KSYDQERKKG 120 VPWTEEEHRR FLMGLEKYGK GDWRNISRNF VISKTPTQVA SHAQKYYLRQ LSGEKERKRP 180 SIHDITTVNL TNNELLNNNN KLMCEVKSYM SPLQRSTSPA DVLIGCWNNS FDGDLMAFGQ 240 FV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 8e-77 | MYB family protein |