PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18066.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 276aa    MW: 31385.3 Da    PI: 7.2522
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19126176255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta +Aa a+++a+ kl+g
  PHU18066.1 126 RYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAMAYDRAAFKLRG 176
                 8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDTSSLDLIR QHLLDDDVVF MENYCTSSET TSTLYSQSSS SSESLESFVS ELKTESNFSF  60
YPESSNLEFC GFFNNNSKME FNPSEFQVKP QKKKSFNERK PLLNISIPCV KKTDEPKTGE  120
NSEKKRYRGV RQRPWGKFAA EIRDPNRKGT RVWLGTFDTA VDAAMAYDRA AFKLRGSKAI  180
LNFPLEVSNF KQENNEIEKK VNLNSCGKRA REEIENEDQV VMKKEVKREQ MVATPLTPSS  240
WAPIWDCGNA KGIFEVPPLS PLSPHPSFGF SQLLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.17e-46ERF family protein