PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17995.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 469aa MW: 51542.1 Da PI: 6.6991

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.4e-39	106	166	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPryfCk+C+ryWt+GG++rnvPvG+grrknk+ss PHU17995.1 106 PDKILPCPRCNSMETKFCYYNNYNVNQPRYFCKKCQRYWTAGGTMRNVPVGSGRRKNKSSS 166 7899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSEVRDPGIK LFGKTIILPI DDLRSSSINT TSHDDQITSE GELTQSKRDD FTNSTADESV 60 ELEISSSISD DPKAQDAYKI TLSPKSTEKD DPNEASGTQD KVLKKPDKIL PCPRCNSMET 120 KFCYYNNYNV NQPRYFCKKC QRYWTAGGTM RNVPVGSGRR KNKSSSTSSY RHIMVSDALQ 180 AARFEAANGM NLPSYRTNGT VLAFGSDKPL CDSMASILNI AEKSHNSIQN GFNGSEQRML 240 ASCGGKEIGN DRSSEACSTT SNSTEKGNES TARDLAWKNF QAFPPQVHHF PGPPWPYTCN 300 AAPWTSAVPP PTLAPSGFPV SFYPPPPYWS CTMASPWNVP WVSPPPSSAS CSVHGNNPNS 360 PTLGKHSRDE SSFNPSNMAK EDTLQDKDGE RCVLIPKTLR IDDLDEAAKT SMWSTLGIKN 420 DKNDSANGTR LFKAFNTKVD ERNNESDTNL VLQANPAALS RSHNFQEST

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSEVRDPGIK LFGKTIILPI DDLRSSSINT TSHDDQITSE GELTQSKRDD FTNSTADESV  60
ELEISSSISD DPKAQDAYKI TLSPKSTEKD DPNEASGTQD KVLKKPDKIL PCPRCNSMET  120
KFCYYNNYNV NQPRYFCKKC QRYWTAGGTM RNVPVGSGRR KNKSSSTSSY RHIMVSDALQ  180
AARFEAANGM NLPSYRTNGT VLAFGSDKPL CDSMASILNI AEKSHNSIQN GFNGSEQRML  240
ASCGGKEIGN DRSSEACSTT SNSTEKGNES TARDLAWKNF QAFPPQVHHF PGPPWPYTCN  300
AAPWTSAVPP PTLAPSGFPV SFYPPPPYWS CTMASPWNVP WVSPPPSSAS CSVHGNNPNS  360
PTLGKHSRDE SSFNPSNMAK EDTLQDKDGE RCVLIPKTLR IDDLDEAAKT SMWSTLGIKN  420
DKNDSANGTR LFKAFNTKVD ERNNESDTNL VLQANPAALS RSHNFQEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	9e-95	Dof family protein