PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU17856.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 230aa MW: 25354 Da PI: 6.1374 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 57.4 | 3e-18 | 61 | 119 | 2 | 57 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 +D y+WrKYGqK + g+++pr YrC+ + +++k v+rs+ +p +e+tY g+ PHU17856.1 61 EDRYSWRKYGQKLIVGAKYPREHYRCACRclsYREATKMVQRSEAEPLSFEVTYGGSNS 119 79************************9987767789******************99866 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MGEGGRGTKS WMGEEGHVTG SRAMHKMGCR RLQSSALKGA SRAHPGAEYI QARSGEEVPP 60 EDRYSWRKYG QKLIVGAKYP REHYRCACRC LSYREATKMV QRSEAEPLSF EVTYGGSNSC 120 GQENKNQNGE RVVLTKETQR DEVGRAAGET PECYTPEMVS TPNTSFNNSS AGVVFSNSNP 180 VFNITNSDLI PTPTSSPYPD TDISLEDDSL TVLFDDVPEN ARSTYKCNAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.2 | 1e-21 | WRKY family protein |