PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17392.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 687aa MW: 77433.1 Da PI: 6.6519

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00038	412	433	10	30
HHHHHHHHHHHHHHHCTSCC.C CS HLH 10 rrRRdriNsafeeLrellPk.a 30 rrRR+ + s +++L ++lP+ + PHU17392.1 412 RRRRSTLSSEIQKLAKILPTyL 433 9******************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MSDMFQQFSD LFLLSPMVYS FVATDNIARK RKESESSSSK GTSAIARLHP PLYELALQAL 60 SQSRAEDNER REEECLKRDD PNANSPSAKE LIKTFSIDCY PIVHPWLVLT NRELKMPFFL 120 TLRSVQTLLG RKVIDGIKME LFGATTIRRK IILEGELVTV DDGSGSGAAI GANDAHLIVF 180 GTKSHYDYDH TGCTGFSQDF STSSECSACK CQDCKAKHDG VINFINALTA FVKEMTSKRG 240 VIPSKRISYP YTPLEIKTAK RRKKDTSKAS SSIEKSKIAT PLSLSFTVVQ YESYVAIDGS 300 SVRNYHTSLI YLFEFILTND SSIVDVTVEA TTEEHNITVD NPSTASKEEE KAEPVSLGER 360 KNCLFEGISA SLPWNLVDEV YISINYGDEF HWVLAFVVLK ERRIRVYDSK SRRRRSTLSS 420 EIQKLAKILP TYLNMSIFLD QKVHTDWSSI ETYWDKIGNS FDVQYVEGIA QQTIGILDCG 480 FFVAAYVEYL SDGLQVPNDG LDVGLLRKIC VALLWRYGEA KAQKTYASNI KDPRRPKPNF 540 AAPVKNNLSI LSRSLYIEFV NTVLETSINS IDDQPIPTDN QFVTTVYAVI NVATDGATAG 600 TNQTTIKFGR SELIRLRDHE YGSDALLRFN VVFLIELTRD QKLYTNFEDG NDQLEYRINK 660 LEASLKMIKI HKLEQASDLL QKMLKAF

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MSDMFQQFSD LFLLSPMVYS FVATDNIARK RKESESSSSK GTSAIARLHP PLYELALQAL  60
SQSRAEDNER REEECLKRDD PNANSPSAKE LIKTFSIDCY PIVHPWLVLT NRELKMPFFL  120
TLRSVQTLLG RKVIDGIKME LFGATTIRRK IILEGELVTV DDGSGSGAAI GANDAHLIVF  180
GTKSHYDYDH TGCTGFSQDF STSSECSACK CQDCKAKHDG VINFINALTA FVKEMTSKRG  240
VIPSKRISYP YTPLEIKTAK RRKKDTSKAS SSIEKSKIAT PLSLSFTVVQ YESYVAIDGS  300
SVRNYHTSLI YLFEFILTND SSIVDVTVEA TTEEHNITVD NPSTASKEEE KAEPVSLGER  360
KNCLFEGISA SLPWNLVDEV YISINYGDEF HWVLAFVVLK ERRIRVYDSK SRRRRSTLSS  420
EIQKLAKILP TYLNMSIFLD QKVHTDWSSI ETYWDKIGNS FDVQYVEGIA QQTIGILDCG  480
FFVAAYVEYL SDGLQVPNDG LDVGLLRKIC VALLWRYGEA KAQKTYASNI KDPRRPKPNF  540
AAPVKNNLSI LSRSLYIEFV NTVLETSINS IDDQPIPTDN QFVTTVYAVI NVATDGATAG  600
TNQTTIKFGR SELIRLRDHE YGSDALLRFN VVFLIELTRD QKLYTNFEDG NDQLEYRINK  660
LEASLKMIKI HKLEQASDLL QKMLKAF