PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17193.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 269aa MW: 28068.4 Da PI: 10.3876

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.7	4.8e-39	32	133	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskks 100 a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ +s+ +++++ ++ +k++ PHU17193.1 32 AVKKPPVKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPASFS-TVSVSVRNSSTGISSSLSAPLDQKSQ 129 789******************************************************************777.44444444444455444444444444 PP TCP 101 qksa 104 q+++ PHU17193.1 130 QQQQ 133 4443 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSTSAEGNGA IIDPQRQQQQ QPSGVGTNGA LAVKKPPVKD RHSKVDGRGR RIRMPIVCAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTIPA SFSTVSVSVR NSSTGISSSL 120 SAPLDQKSQQ QQQLIPAPFI LGKRLRSDEE NLEHGNKDDV GAGAGTATAS VGPTAGFWAV 180 PARSDFGQIW SFAAAAPPEM MAPTSAAAAA AAAAALSSQS SRFFQQQMGE ASAARVGNYL 240 PMTQGHLNLL ASLSGPPQPS SGRRDDDGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-69	TCP family protein