PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17145.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 714aa MW: 79508.6 Da PI: 10.0243

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.9	3.9e-11	120	165	3	52
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 ++GVr +k +g +vAe +dp + +r++lg+f t eeA +a+ a ++ PHU17145.1 120 FSGVRKRK-QGEYVAEKWDPI----TkRRVWLGTFNTVEEATEAYLAKQRE 165 89*999.9**99962....35****************998776 PP
2	AP2	34.1	6.6e-11	291	330	4	47
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 GVr k +gr+ AeIrdp +r k+++lg+f+t eeA +a+ PHU17145.1 291 LGVRKQK-NGRYGAEIRDP----IRhKNVWLGTFDTVEEASQACL 330 69888.8*****7....357************99975 PP
3	AP2	26.7	1.4e-08	538	583	2	51
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 ++ GV+ +k +g++ +eI p ++ k+++lg+f t eeA k + ++ PHU17145.1 538 RIVGVHKNK-WGKYTSEIINP----ISkKKIWLGTFSTYEEASKTYQSKKL 583 789*999.***9996....246*************98866655 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MEPERAIAIE NVEENHCRVY AHHMFDKMPS SNSTYRSVAV GERSYSTVLG LQHLQHTANP 60 ITKKRVLFGT SGTAEVASEG SFDCAHHVLD EMTSSNSTNK TAAAEISDSA VLNLKYLTNF 120 SGVRKRKQGE YVAEKWDPIT KRRVWLGTFN TVEEATEAYL AKQREFANAH HMFDDMPSSN 180 SINKTAARSA AAESANAVER DRADHGRTLF IKEVSFRDKT PSLGAELHSM GKLRKKDPFK 240 KKKVRKNFNS NIHESKKPIN VMNQGKEPVN CVESDRCNTV RRNRKAKTGL LGVRKQKNGR 300 YGAEIRDPIR HKNVWLGTFD TVEEASQACL SKKAEFDMLS QGKKKNKPKN YDQTLPESSA 360 GASLFVANGQ TLHAANVGRN KENKPKNCDQ IQPESSVGAS LFVANYQTLH AANVGRNKEN 420 EPKNCDQIQP ESSVGASLFV ANDQTLHAAN VGRNKENKPK NCDQIQPGSS VGASLFVAND 480 QTLLAANVGR NKVNKPKNCG LTQPGSSVRV SLSMANDQTL NAANVSRNEK MDSPKTTRIV 540 GVHKNKWGKY TSEIINPISK KKIWLGTFST YEEASKTYQS KKLEFNKLVK PKKCNKKIHS 600 TSKEKQVGKE KFGNVKSGHV NYERFQPESA VKFDILRSKE AELQSKMPVD LSTEEKQGGQ 660 EDADMWTGQW VKLPNGKEVN FSLKLGLPII DSYGSLLGEF SSLDDLRIYD ESIY

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MEPERAIAIE NVEENHCRVY AHHMFDKMPS SNSTYRSVAV GERSYSTVLG LQHLQHTANP  60
ITKKRVLFGT SGTAEVASEG SFDCAHHVLD EMTSSNSTNK TAAAEISDSA VLNLKYLTNF  120
SGVRKRKQGE YVAEKWDPIT KRRVWLGTFN TVEEATEAYL AKQREFANAH HMFDDMPSSN  180
SINKTAARSA AAESANAVER DRADHGRTLF IKEVSFRDKT PSLGAELHSM GKLRKKDPFK  240
KKKVRKNFNS NIHESKKPIN VMNQGKEPVN CVESDRCNTV RRNRKAKTGL LGVRKQKNGR  300
YGAEIRDPIR HKNVWLGTFD TVEEASQACL SKKAEFDMLS QGKKKNKPKN YDQTLPESSA  360
GASLFVANGQ TLHAANVGRN KENKPKNCDQ IQPESSVGAS LFVANYQTLH AANVGRNKEN  420
EPKNCDQIQP ESSVGASLFV ANDQTLHAAN VGRNKENKPK NCDQIQPGSS VGASLFVAND  480
QTLLAANVGR NKVNKPKNCG LTQPGSSVRV SLSMANDQTL NAANVSRNEK MDSPKTTRIV  540
GVHKNKWGKY TSEIINPISK KKIWLGTFST YEEASKTYQS KKLEFNKLVK PKKCNKKIHS  600
TSKEKQVGKE KFGNVKSGHV NYERFQPESA VKFDILRSKE AELQSKMPVD LSTEEKQGGQ  660
EDADMWTGQW VKLPNGKEVN FSLKLGLPII DSYGSLLGEF SSLDDLRIYD ESIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	8e-14	ERF family protein