PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17143.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 371aa    MW: 41459.3 Da    PI: 4.5893
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS31.62.2e-102903511071
        GRAS  10 eavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetse 71 
                 ++v++++ + ++ lL++++e++sp g  +qRla++f+ +L+  la+ +s++ykal  ++t +
  PHU17143.1 290 DCVENDQRKSTNDLLKQMREHSSPFGYGNQRLAHCFADGLEVALAGIGSQIYKALVNKRTVT 351
                 579999999**********************************************7766643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MTIGATSYKT TFGLEENDEE QAVEGDDGDV SKEDVEEEVV VKKEQNYVVG HEENVRVGEN  60
EISCGLIDGA KLDEHLVHVE ERLEKMEAHS EKMVTLENKS QNPMTNYVLP SAASSCQNVH  120
GTEMAMEATS YKINSGPEDD EEQAAEEEAE EDAGDMSKED FVEEVVVKKA QNYVVGHEEN  180
VTVGENEISC GLSVGAKLDE RLVQVEERLE KMETLLVDIN EKLNCLVKMQ DAKGSMDLRR  240
PAKYMSSLWI GNGRSKRKHR VAELIRQSCK HRRLGRGDKA VGHPVALHDD CVENDQRKST  300
NDLLKQMREH SSPFGYGNQR LAHCFADGLE VALAGIGSQI YKALVNKRTV TSGTSIWHDK  360
LLLYCLELCD M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.13e-18GRAS family protein