PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17086.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 167aa    MW: 18112.1 Da    PI: 4.8629
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB172.45e-5429123195
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                 vreqdr+lPian++rimkk lP+naki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk yl +yre ++
  PHU17086.1  29 VREQDRYLPIANIGRIMKKGLPTNAKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLIWALTTLGFEDYIEPLKGYLIRYREGDT 123
                 69*****************************************************************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MAEVPASPGG GGASHESGGG DEQSPQSNVR EQDRYLPIAN IGRIMKKGLP TNAKIAKDAK  60
DTVQECVSEF ISFITSEASD KCQKEKRKTI NGDDLIWALT TLGFEDYIEP LKGYLIRYRE  120
GDTKGSVRAG DTSARKDIVG GHLGPSSQQF VYDGSFTQDL DYGNSQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-68NF-YB family protein