PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16253.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 839aa MW: 92875.6 Da PI: 6.4038

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.3	1.7e-19	316	416	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++++ +++lv++ PHU16253.1 316 FEKVLSASDAGRIGRLVLPKACAEAYfpTINQSEGLPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVIFSRID-PGGKLVIG 412 99************************666667778***********99899999999.*******************987.99999999 PP EE-S CS B3 96 vfrk 99 ++++ PHU16253.1 413 FRKA 416 9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MGSMICMNEL CRATTSSEWK KGWGFKSGGF AKLCYNCGSA FENFVFCETF HPDESGWREC 60 RTCRKRIHCG CIASKYLYEY LDYGGVACIL CARHLDGHST RPIQIPGDDL RNGTLGSKTA 120 QPLVVENKMD EHEFDRRRLM QLSKTGESSE PGQIFQTQKN LPIGNMSTCF SNLSQQPFGA 180 SLFGKPDTER PGQGVKDMYD SINQPSLNFS LSTPIGTSSS GQPFPGGDIE GREQSKASLF 240 QQSQRARHIL PKPPKPSPTS GSESIKAMAS PARIARPPAE GRGGRNQLLP RYWPRITDQE 300 LQQISGDLKS TVVPLFEKVL SASDAGRIGR LVLPKACAEA YFPTINQSEG LPIRIQDIKG 360 KEWTFQFRFW PNNNSRMYVL EGVTPCIQNM QLQAGDTVIF SRIDPGGKLV IGFRKATNNV 420 DVQESQTPNL TNGNGSAETS FSGMAENFPN GGRTSDDSMN RQVPMSEKKK SRNIGSKNKR 480 LLMHADDAME LRITWEEIQE LFRPSPTAKS TIVVIEDCEF EEYEEPPVFG KRTIFTARSS 540 GDQEQWAQCD SCSKWRRLPV HVLLPAKWTC SDNIWDSRRC SCAAPDEINP RELEALFSVG 600 KDPKRRKLVE TNEDCEPSGL DALATLAVLG DNIGDLGEPS VGATTKHPRH RPGCTCIVCI 660 QPPSGKGKHQ PTCKCNVCLT VKRRFKTLMM RKKKKQSERE AELAQAKDQV PPKDESETDV 720 ISGIELLQMN HSENELMNNS ENERNSNGDQ AEEFAAGKGQ LDLNCDPNRD DDMLVEATAG 780 MSMTSLVNAA NLPLEYLTQK GLESLGTSLL SQAAGESEDH HPDNVFAKTA DAEPESKGD

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MGSMICMNEL CRATTSSEWK KGWGFKSGGF AKLCYNCGSA FENFVFCETF HPDESGWREC  60
RTCRKRIHCG CIASKYLYEY LDYGGVACIL CARHLDGHST RPIQIPGDDL RNGTLGSKTA  120
QPLVVENKMD EHEFDRRRLM QLSKTGESSE PGQIFQTQKN LPIGNMSTCF SNLSQQPFGA  180
SLFGKPDTER PGQGVKDMYD SINQPSLNFS LSTPIGTSSS GQPFPGGDIE GREQSKASLF  240
QQSQRARHIL PKPPKPSPTS GSESIKAMAS PARIARPPAE GRGGRNQLLP RYWPRITDQE  300
LQQISGDLKS TVVPLFEKVL SASDAGRIGR LVLPKACAEA YFPTINQSEG LPIRIQDIKG  360
KEWTFQFRFW PNNNSRMYVL EGVTPCIQNM QLQAGDTVIF SRIDPGGKLV IGFRKATNNV  420
DVQESQTPNL TNGNGSAETS FSGMAENFPN GGRTSDDSMN RQVPMSEKKK SRNIGSKNKR  480
LLMHADDAME LRITWEEIQE LFRPSPTAKS TIVVIEDCEF EEYEEPPVFG KRTIFTARSS  540
GDQEQWAQCD SCSKWRRLPV HVLLPAKWTC SDNIWDSRRC SCAAPDEINP RELEALFSVG  600
KDPKRRKLVE TNEDCEPSGL DALATLAVLG DNIGDLGEPS VGATTKHPRH RPGCTCIVCI  660
QPPSGKGKHQ PTCKCNVCLT VKRRFKTLMM RKKKKQSERE AELAQAKDQV PPKDESETDV  720
ISGIELLQMN HSENELMNNS ENERNSNGDQ AEEFAAGKGQ LDLNCDPNRD DDMLVEATAG  780
MSMTSLVNAA NLPLEYLTQK GLESLGTSLL SQAAGESEDH HPDNVFAKTA DAEPESKGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	601	607	KDPKRRK
2	682	693	KRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein