PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU16061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 438aa MW: 48141.4 Da PI: 4.3342 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.2 | 2.4e-27 | 118 | 183 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg PHU16061.1 118 RYDSSLGLLTKKFINLIKHAEDGVLDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 183 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MQGNQQSKLP FTSSKPPLGD YHRFSTDPLQ QPEGIALKSS TPLKRKSEIA NYEQGVGTQV 60 AVSGYADVSS PMQTPISGKA GKSQKVPRTS KARSAAQAAA SNLGSPSGNN VTPVGPCRYD 120 SSLGLLTKKF INLIKHAEDG VLDLNKAADT LEVQKRRIYD ITNVLEGIGL IEKKLKNRIQ 180 WKGLDVSKPG EADESVTSLQ AGVENLTIEE NRLDEQIREM QERLRDLSED ENNQRWLFVT 240 EDDIKSLPCL QNETLIAIKA PHGTTLEVPD PDEAVDYPQR RYRIVLRSTM GPIDVYLVSQ 300 FEEKFEEINA VEAPSTMPST SGFIENETGT LPAEDGRGVD DGIEEQENQR EFPDAGTSQD 360 PVSGFMKIVP DVDNEADYWL LSDADVSITD MWRTESALDW NELNAIHEDY SIADVSSPRA 420 QTPPSSTTEV PSTSTPGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-148 | E2F/DP family protein |