PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16061.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family E2F/DP
Protein Properties Length: 438aa    MW: 48141.4 Da    PI: 4.3342
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.22.4e-27118183171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++l++++e+g+++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  PHU16061.1 118 RYDSSLGLLTKKFINLIKHAEDGVLDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 183
                 6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MQGNQQSKLP FTSSKPPLGD YHRFSTDPLQ QPEGIALKSS TPLKRKSEIA NYEQGVGTQV  60
AVSGYADVSS PMQTPISGKA GKSQKVPRTS KARSAAQAAA SNLGSPSGNN VTPVGPCRYD  120
SSLGLLTKKF INLIKHAEDG VLDLNKAADT LEVQKRRIYD ITNVLEGIGL IEKKLKNRIQ  180
WKGLDVSKPG EADESVTSLQ AGVENLTIEE NRLDEQIREM QERLRDLSED ENNQRWLFVT  240
EDDIKSLPCL QNETLIAIKA PHGTTLEVPD PDEAVDYPQR RYRIVLRSTM GPIDVYLVSQ  300
FEEKFEEINA VEAPSTMPST SGFIENETGT LPAEDGRGVD DGIEEQENQR EFPDAGTSQD  360
PVSGFMKIVP DVDNEADYWL LSDADVSITD MWRTESALDW NELNAIHEDY SIADVSSPRA  420
QTPPSSTTEV PSTSTPGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-148E2F/DP family protein