PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU15918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 228aa MW: 26570.5 Da PI: 7.9604 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.3e-18 | 64 | 109 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++l ++++ ++G++ W++Ia +++ gRt++++k++w++++ PHU15918.1 64 RGKMTPHEEQLVLQLHSKYGNR-WSKIAGKLP-GRTDNEIKNYWRTHM 109 89********************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MDRTRRSSAS ILCEDVWRSS LGFSGESFRF EVGWRERKNK LGLKRSGKSC RLRWVNYLNP 60 GLKRGKMTPH EEQLVLQLHS KYGNRWSKIA GKLPGRTDNE IKNYWRTHMR KLAQDEKKNN 120 KASISPSSSN FSNCSSSSAN SPAVDSSTEQ NELLQVVEAN KTYEEDQNMM VYSMDEIWKE 180 VESSQEIETR NDLPVMASNT WDYCPDSLWM THDHYYYDNT QDFSFFTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G46130.4 | 8e-51 | MYB_related family protein |