PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU15853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ARF | ||||||||
Protein Properties | Length: 688aa MW: 76472.8 Da PI: 5.9574 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 71.7 | 9.2e-23 | 116 | 216 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W +++i+r++++r++lt+GW+ Fv+ ++L +gD++vF +++++ l PHU15853.1 116 FAKTLTQSDANNGGGFSVPRYCAETIfptldlsADPPVQ--TVMAKDVHGEIWPFRHIFRGTPKRHLLTSGWSTFVNKKKLVAGDSIVFL--REESGAL 210 89****************************996555555..8************************************************..5589999 PP EEEEE- CS B3 93 vvkvfr 98 +v+++r PHU15853.1 211 CVGIRR 216 ****98 PP | |||||||
2 | Auxin_resp | 111.6 | 7.7e-37 | 281 | 361 | 4 | 83 |
Auxin_resp 4 aastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 ast+++Fe+vY+Prast+eF+v++++v++a++v++++GmRfkmafeted s++++ +G ++ v+ +dpvrWp+S+Wr+L+ PHU15853.1 281 FASTGQPFEIVYYPRASTPEFCVRASSVNAAMSVQWCLGMRFKMAFETEDLSRISWfMGSISTVQVADPVRWPHSPWRLLQ 361 689****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 688 aa Download sequence |
MASEMEEVAE KCLDSELWHA CAGSMVQIPA VNSKIYYFPQ GHAEHTCTDV DFSALPRIPA 60 MILCRVDTVK FLADPKTDEI YAKIRLIPVL NNEHDFEDDT FFGSSVVETT EKPISFAKTL 120 TQSDANNGGG FSVPRYCAET IFPTLDLSAD PPVQTVMAKD VHGEIWPFRH IFRGTPKRHL 180 LTSGWSTFVN KKKLVAGDSI VFLREESGAL CVGIRRVKRG GIGGQETQSG WNLIAGNYGG 240 SYAYLKEDEK SSSNGNLNSS GGRFRDKGKV SPESVVRASY FASTGQPFEI VYYPRASTPE 300 FCVRASSVNA AMSVQWCLGM RFKMAFETED LSRISWFMGS ISTVQVADPV RWPHSPWRLL 360 QVTWDEPDLL QNVKHVNPWL VELVSNMPVI HLSPPRKRLC LPQECALDCQ FPLPSFSGNP 420 LGSSSPFGYQ PNNITAGIQG ARHAQFGDPL LDFQLSKKLQ LEVLPPVDAD SEIPNDISKV 480 QKESNEDLSS LLSMGISSQM LEKADDVKKP SFLLFGQPIL TEQQMSRVES TNAPPQVQTK 540 RDSSGEAQLK TEEISLGWKD FSECLSSASF LCNRGYHAAE LGAFIGHCKV FLDSEDIGRS 600 IDLSVLGSYA ELYKRLADMF ENERLDMMKI SVLYLDATGA SRQIGDEPFS DFIKTARRLT 660 VLRNPGNGTA RKWLSSTLSR YFKPDRIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30080.1 | 0.0 | ARF family protein |