PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU15589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 734aa MW: 80965.5 Da PI: 6.671 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.5e-19 | 30 | 81 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t++q++ Le++F+++++p++++r +L++ lgL rq+k+WFqNrR++ k PHU15589.1 30 HRHTAHQIQSLEAVFKECPHPDEKTRLQLSRDLGLAPRQIKFWFQNRRTQLK 81 689*********************************************9987 PP | |||||||
2 | START | 167.5 | 9.1e-53 | 222 | 447 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 +a a++el+++ + +ep+W+ks +n d++ q+f+++++ ++ea+r+sgvv+m+ lv ++d++ +W e ++ ka tlevis PHU15589.1 222 IAGNAMEELIRLLQTNEPLWTKSTtdgrHVLNVDTYDQIFPKANSslknpnVRVEASRESGVVIMNGLALVDMFIDVN-KWAEFFPtivsKAGTLEVIS 319 67899********************99999***********9999*********************************.******************** PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX. CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp. 177 g ++lqlm+ e q+lsplvp R +f+R+++q + g+w+ivdvS d +q++ +s+ ++++lpSg+li++++ng+skvtw+ehv+++++ PHU15589.1 320 CGimdsrsSTLQLMYEEQQVLSPLVPtRHLYFLRFCQQIEPGSWAIVDVSYDITQENLYPPSSCKVHKLPSGCLIQDMPNGYSKVTWLEHVEVEEKGSi 418 ********************************************************97799********************************998666 PP HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 178 hwllrslvksglaegaktwvatlqrqcek 206 h l+r l++sg+a+ga +w+ lqr ce+ PHU15589.1 419 HRLYRDLIHSGMAFGAERWLGSLQRMCER 447 ***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 734 aa Download sequence |
MEYGSTGGGA ASSSGGGDAA DAQRKKKRFH RHTAHQIQSL EAVFKECPHP DEKTRLQLSR 60 DLGLAPRQIK FWFQNRRTQL KSQHERADNS ALRSENDRIR CENIAMREAI KNVICPSCGG 120 PPVEHTYFDD QKLRMENLQL KEELDKISSI AAKYMGRPIA QLPPVQPVHL SSLNLMSMSN 180 FGLPGPSLDL DLLPGSSTST VPSLTFPTLN ISDMDKSLMA DIAGNAMEEL IRLLQTNEPL 240 WTKSTTDGRH VLNVDTYDQI FPKANSSLKN PNVRVEASRE SGVVIMNGLA LVDMFIDVNK 300 WAEFFPTIVS KAGTLEVISC GIMDSRSSTL QLMYEEQQVL SPLVPTRHLY FLRFCQQIEP 360 GSWAIVDVSY DITQENLYPP SSCKVHKLPS GCLIQDMPNG YSKVTWLEHV EVEEKGSIHR 420 LYRDLIHSGM AFGAERWLGS LQRMCERYAC LMVSGNSSRE LGGVIPSPEG KKSMMKVSQR 480 MVSSFCASIN PSNGHQWNNI STTNEFEVRA TLQKCTDPGQ PNGVVISAAS TIWLPVPPQH 540 VFNFLRDERT RSQWDVLSNQ NPVQEVAHIA NGSHPGNSIS VLRAYNTSQN NMLILQESCI 600 DSSGSLVVYS PVDLQSINIA MSGEDTTYIP LLPSGFTILR DGRHDGGSNE ASMNNNNDTM 660 GEHNRTGGGR GGGSLVTVAF QILVSSLSSS AKMSPESVNT VNNLIGNTIH QIKAALNCSN 720 FEFNSAAALN TEYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | HD-ZIP family protein |