PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15441.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 295aa    MW: 32096.2 Da    PI: 9.4578
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-1491135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PHU15441.1  91 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 135
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSSACGDESS ATEVTGAGEI MLFGVRVKVD PMRKSVSLNN LSQYEQPNIN NSGGDSKNES  60
LKVAADEGYA SADDAVQHQS NCGRERKRGV PWTEEEHKLF LLGLQKVGKG DWRGISRNFV  120
KTRTPTQVAS HAQKYFLRRS NLNRRRRRSS LFDITTDSVS AMPKVEGENK QEIPVLAPAT  180
LPTVETTKTN AFPVAPTVGP IMIPAQIDMS RDSPTLLRRN HGNSSMLVGA VPMFSLPNPS  240
PVIDLNANQN TTIEPSPLSL RLSLSLDQGQ ASSTRHLGYQ VMSSFSNGES IISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.11e-57MYB_related family protein