PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15419.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 307aa MW: 33952.9 Da PI: 7.0613

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.8	3.1e-40	53	113	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ lkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s PHU15419.1 53 HDQPLKCPRCDSTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKKVS 113 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGITSLQVCM DSSNWLQDTI NEETEFDSSS SPSGGDIFTC GRPLIERKLR PQHDQPLKCP 60 RCDSTHTKFC YYNNYSLSQP RYFCKSCRRY WTKGGTLRNI PVGGGCRKNK KVSSKKLSND 120 NNITPHNVVV SSNSSPISNY PDMALSHFGN FMGINTSNNN NNINHNFMLE NHHHHVPIDF 180 MESKYEALVG TITSSRNQDF LGNVDVTAGM INGYGEMDNS GIVGPNFHGG FCSTFGLPMD 240 GNLNYEGQNI TMDVKPNPKI LSLEWLDQGC SNAGNIKEFF GYLNGGLGSW TGLMNNGYGS 300 SATHPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-44	Dof family protein