PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15414.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 310aa MW: 34353 Da PI: 7.9305

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	99	8.4e-31	60	164	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.......... 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WL+ +ak++i++l+ ++ +++s + + +++ s++++ PHU15414.1 60 GGKDRHSKVCTVKGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIDAAKHEIDKLPPLQMPPPSLShffNIKDHGLSNHHQDFVdstlretglf 158 78*************************************************************888884334453333333333222223344444444 PP TCP 89 .....k 89 PHU15414.1 159 gkekwI 164 443330 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MMNSRKQETD GGDTTNSTKI SSRTNTTTTS ATSTTPSSSS RQTWAGFKNP RIVRVSRTFG 60 GKDRHSKVCT VKGLRDRRIR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLID AAKHEIDKLP 120 PLQMPPPSLS HFFNIKDHGL SNHHQDFVDS TLRETGLFGK EKWIATNHHE QESSSTDHFF 180 QPSSLPTAGM LNNNVMAFNN NNPLISHTWE PNSNLSLGPF GNYHTFSSSL QTDVFPSGSQ 240 LYFCPTAAAT TLSSLVPPPY NSHLNHLHPN SLVPTLQLIS APVNNNPTKG LNLQESDDHH 300 HDNHKEGSDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-41	TCP family protein