PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15290.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 379aa MW: 42761.5 Da PI: 5.0783

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15290.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116	3.8e-36	18	149	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 ppGfrF Ptd el+++yL +kv+g+++ +i+evd+y+++P +L+ +++ee+ +yfF++r +k+++g+r+ r t+ +gyWk t k ++v++ k+ PHU15290.1 18 PPGFRFAPTDAELLQYYLGRKVNGESILP-GIIHEVDVYECDPYHLQ-GISKEEEFTYFFTSRGRKHPNGSRTDRNTRdgKGYWKMTSKLTNVYADKND 114 9***********************877.79**********8.666667777**************9987789********96433 PP NAM 99 l...vglkktLvfykgrapkge...ktdWvmheyrl 128 g k+tLv++ +apkg+ kt+W+mhe++l PHU15290.1 115 IssyLGKKNTLVYF-VKAPKGKkdpKTNWIMHEFEL 149 35669*****.55555554449******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSGEQEVDYD DQWKQIIPPG FRFAPTDAEL LQYYLGRKVN GESILPGIIH EVDVYECDPY 60 HLQGISKEEE FTYFFTSRGR KHPNGSRTDR NTRDGKGYWK MTSKLTNVYA DKNDISSYLG 120 KKNTLVYFVK APKGKKDPKT NWIMHEFELA QKKVDSPSTS SCPSQENPFN DYVVCRVYNR 180 QVKDKRETDE EKDLIDSLIG SKPFMTDHNN GEAAQVLPST KRKFEPKNET ITCDHPHAIA 240 MAMNSNYFYA SHELLAATML SNTMTSNNFD DTLKAITSSS SQDIVAPGEG VLGVEGISDQ 300 ARAIVYQEYM CQQSPHIAEK QNSGLVDHVE IGANDAQEGP HNVTTRRGDE IDYDNISLGL 360 ANNMGPVTMG DLWERYFGS

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSGEQEVDYD DQWKQIIPPG FRFAPTDAEL LQYYLGRKVN GESILPGIIH EVDVYECDPY  60
HLQGISKEEE FTYFFTSRGR KHPNGSRTDR NTRDGKGYWK MTSKLTNVYA DKNDISSYLG  120
KKNTLVYFVK APKGKKDPKT NWIMHEFELA QKKVDSPSTS SCPSQENPFN DYVVCRVYNR  180
QVKDKRETDE EKDLIDSLIG SKPFMTDHNN GEAAQVLPST KRKFEPKNET ITCDHPHAIA  240
MAMNSNYFYA SHELLAATML SNTMTSNNFD DTLKAITSSS SQDIVAPGEG VLGVEGISDQ  300
ARAIVYQEYM CQQSPHIAEK QNSGLVDHVE IGANDAQEGP HNVTTRRGDE IDYDNISLGL  360
ANNMGPVTMG DLWERYFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-36	NAC family protein