PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15265.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 518aa MW: 56689.5 Da PI: 4.8986

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.8e-11	329	371	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++P + K++ a+iL A+eY+k+L PHU15265.1 329 MAERRRRKKLNDRLYMLRSVVPRiS------KMDRASILGDAIEYLKEL 371 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MLSRVNSMVW DMQSKEEEEE GINKEKNING VVENKEDMEM GSLPTFKSML QGTDVEWYMS 60 NNNMQNQNEN ATSICFTQNF TELAETENSL FLQLPLPVDS SSSCPPASAS VFNNLEPSQL 120 HYFLAQKSIN NNNPLDYGFL EAQGLSEGGF LASGFHDLGS QNQMGNPNLT SFTQYPLSHL 180 PQNSAASTGF SPLGFIDGCA NESSMFVRSK LLTPLDNFAS IGAQPTLFQK RAALRKNLGD 240 TNGGNLGDFG GQIGQNEGKR KWGSGEELDD VSFDGGCTLS YDSDDLGENV TNKVDDSVKN 300 GGNVSNMTSS AVDGNQKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP RISKMDRASI 360 LGDAIEYLKE LLQKINDLHN ELESTPPSSS LSQTTSFYPL TPTAPGLPGR IKEEVYPSSF 420 ASPLSSPTGQ PARVEVKARD GRAVNIHMFC SRRPGLLLST MRALDNLGLD IQQAVISCFN 480 GFALDIFRAE QCKEGQQDFH PDQIKAVLLD SAGCHGMI

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MLSRVNSMVW DMQSKEEEEE GINKEKNING VVENKEDMEM GSLPTFKSML QGTDVEWYMS  60
NNNMQNQNEN ATSICFTQNF TELAETENSL FLQLPLPVDS SSSCPPASAS VFNNLEPSQL  120
HYFLAQKSIN NNNPLDYGFL EAQGLSEGGF LASGFHDLGS QNQMGNPNLT SFTQYPLSHL  180
PQNSAASTGF SPLGFIDGCA NESSMFVRSK LLTPLDNFAS IGAQPTLFQK RAALRKNLGD  240
TNGGNLGDFG GQIGQNEGKR KWGSGEELDD VSFDGGCTLS YDSDDLGENV TNKVDDSVKN  300
GGNVSNMTSS AVDGNQKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP RISKMDRASI  360
LGDAIEYLKE LLQKINDLHN ELESTPPSSS LSQTTSFYPL TPTAPGLPGR IKEEVYPSSF  420
ASPLSSPTGQ PARVEVKARD GRAVNIHMFC SRRPGLLLST MRALDNLGLD IQQAVISCFN  480
GFALDIFRAE QCKEGQQDFH PDQIKAVLLD SAGCHGMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	337	KKKGLPAKNLMAERRRRKK
2	331	338	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-108	bHLH family protein