PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU15052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C3H | ||||||||
Protein Properties | Length: 530aa MW: 60854.9 Da PI: 9.155 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.1 | 9.7e-06 | 505 | 526 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +Crf+a+ G C yG +Ck+ H+ PHU15052.1 505 TPCRFYAQ-GRCYYGHSCKYLHD 526 69******.*************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 530 aa Download sequence |
MDVSDSDSTD YDSDDDPTFD LLEEETRSTL SKLSIKKHNS SKDMSARRNV SKALEESVEE 60 EQDEDKTDPK LGEKDQRSYE TIQKTIKAGQ IEKLKVEQCK IYLRKHALRL TGSKDTLIQR 120 IKEHTDILDG RGEEKYPPSS FVLNCKGDAC TGDVVMFEQN VYEMFSIASR SATGPPCGTR 180 IVAGRIVKES YGAKKQQHTF TVEVLWSKGE KPLPPLHPLL IKGRNLYRLK TLRQKWDDEA 240 ERQKILSEKH ARGSVARSNR ETRVQEKEMR KLQRENRVST GYKEKKSVAE SKGRMPHQHQ 300 MNIAHSKGKQ LHSLSMNSVN KKDQPQVEVV DNSQKDEQKE CRKFTNVIQE NVFPNQRQPL 360 TNVNLNDPSS YRERQQGFGE SYTSNPSKIP LRVYNSNMHM PIWRGSSYGG NTNNYNSLSR 420 MHDSNAHNIP TYSLSRMHDS NAHNIPTYSD GGYNNCNTSR SPLREHGHMY TYGHSQNMNW 480 QARNGWCNAG AAKRPFQGQC EEQKTPCRFY AQGRCYYGHS CKYLHDSVEI |