PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15052.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C3H
Protein Properties Length: 530aa    MW: 60854.9 Da    PI: 9.155
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.19.7e-06505526426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                  +Crf+a+ G C yG +Ck+ H+
  PHU15052.1 505 TPCRFYAQ-GRCYYGHSCKYLHD 526
                 69******.*************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    
MDVSDSDSTD YDSDDDPTFD LLEEETRSTL SKLSIKKHNS SKDMSARRNV SKALEESVEE  60
EQDEDKTDPK LGEKDQRSYE TIQKTIKAGQ IEKLKVEQCK IYLRKHALRL TGSKDTLIQR  120
IKEHTDILDG RGEEKYPPSS FVLNCKGDAC TGDVVMFEQN VYEMFSIASR SATGPPCGTR  180
IVAGRIVKES YGAKKQQHTF TVEVLWSKGE KPLPPLHPLL IKGRNLYRLK TLRQKWDDEA  240
ERQKILSEKH ARGSVARSNR ETRVQEKEMR KLQRENRVST GYKEKKSVAE SKGRMPHQHQ  300
MNIAHSKGKQ LHSLSMNSVN KKDQPQVEVV DNSQKDEQKE CRKFTNVIQE NVFPNQRQPL  360
TNVNLNDPSS YRERQQGFGE SYTSNPSKIP LRVYNSNMHM PIWRGSSYGG NTNNYNSLSR  420
MHDSNAHNIP TYSLSRMHDS NAHNIPTYSD GGYNNCNTSR SPLREHGHMY TYGHSQNMNW  480
QARNGWCNAG AAKRPFQGQC EEQKTPCRFY AQGRCYYGHS CKYLHDSVEI