PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14840.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 856aa MW: 95924.9 Da PI: 7.574

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174	2.1e-54	19	135	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwl+++ei++iL n++++ lt++++++p+ gsl+L++rk+vryfrkDG++w+kkkdgktv+E+hekLK g+ +vl+cyYah+e+n++fqrr+yw PHU14840.1 19 QEaNHRWLRPHEICEILRNHQSFYLTQQPPDKPPGGSLFLFDRKVVRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSSDVLHCYYAHGEDNKNFQRRSYW 117 5559********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +Lee+le+i+lvhy+evk PHU14840.1 118 MLEEKLERIILVHYREVK 135 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
MLMLMAHTIQ PLDLEHILQE ANHRWLRPHE ICEILRNHQS FYLTQQPPDK PPGGSLFLFD 60 RKVVRYFRKD GHNWRKKKDG KTVKEAHEKL KAGSSDVLHC YYAHGEDNKN FQRRSYWMLE 120 EKLERIILVH YREVKEGYKV GASRLQPVHP GPVLENPQSS STPWFESGLI IVQESHTSNP 180 SSVDSKEQAL SSELHSEDSK GLVELSRDSF QLNSQVSSLM SAEFHGSCRN LLNVTLQQKF 240 YSGNLTVADL LSCNLTYGRW DAGKAVKDVA NIRNRLTITS GEVFEENIHV APGHSLSPDK 300 LFSISDFSPD WVYSGVETKV LIIGTFLDLG KRPTCQKWSC MFGEVEVPAE VLNEGVIRCQ 360 VPSHAPGLVP FYLTCSNRVA CSEVREFEYR ENPSELALAH RPSDEECVEV QLAKLLYSGL 420 NKKLLDCSSG ECEKCKLKTL LCSLKFTAGN ASERLEDLLS IIEGNHIIFG DVLNQSIMKD 480 KLYEWLVSRA HEEDKGPNIL DDGGRGVIHL VASLGYEWGL LPLIAAGISP NFRDARGRTA 540 LHWAAHYGRE DMVIALIKLG VAAGAVDDPT TAFPGGQTAA DLAFSRGHKG IAGYLAESDL 600 TALHQSLGTN NNALDSIAAG LEAEKAFESA AQEVVPLNGT IDDDISLKGS LASLTKSAQA 660 AALIRAAFRS HSFRQRQLTN SRNDVFEDSP DLVSLGSLNK VQKVTHYEDY LHSAAIKIQQ 720 NYHGWNGRRE FLKIQNRIVK IQAHVHGHHV RKQYEKFVWS VSILEKVILR WRRKKTGLRG 780 FRSEKASQKG ALEKEDEYEY LSVGRKQKLA GVEKALARVQ SMVRHPEARD QYMRLVTKFE 840 STKLDDGGAV DRSSPI

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

MLMLMAHTIQ PLDLEHILQE ANHRWLRPHE ICEILRNHQS FYLTQQPPDK PPGGSLFLFD  60
RKVVRYFRKD GHNWRKKKDG KTVKEAHEKL KAGSSDVLHC YYAHGEDNKN FQRRSYWMLE  120
EKLERIILVH YREVKEGYKV GASRLQPVHP GPVLENPQSS STPWFESGLI IVQESHTSNP  180
SSVDSKEQAL SSELHSEDSK GLVELSRDSF QLNSQVSSLM SAEFHGSCRN LLNVTLQQKF  240
YSGNLTVADL LSCNLTYGRW DAGKAVKDVA NIRNRLTITS GEVFEENIHV APGHSLSPDK  300
LFSISDFSPD WVYSGVETKV LIIGTFLDLG KRPTCQKWSC MFGEVEVPAE VLNEGVIRCQ  360
VPSHAPGLVP FYLTCSNRVA CSEVREFEYR ENPSELALAH RPSDEECVEV QLAKLLYSGL  420
NKKLLDCSSG ECEKCKLKTL LCSLKFTAGN ASERLEDLLS IIEGNHIIFG DVLNQSIMKD  480
KLYEWLVSRA HEEDKGPNIL DDGGRGVIHL VASLGYEWGL LPLIAAGISP NFRDARGRTA  540
LHWAAHYGRE DMVIALIKLG VAAGAVDDPT TAFPGGQTAA DLAFSRGHKG IAGYLAESDL  600
TALHQSLGTN NNALDSIAAG LEAEKAFESA AQEVVPLNGT IDDDISLKGS LASLTKSAQA  660
AALIRAAFRS HSFRQRQLTN SRNDVFEDSP DLVSLGSLNK VQKVTHYEDY LHSAAIKIQQ  720
NYHGWNGRRE FLKIQNRIVK IQAHVHGHHV RKQYEKFVWS VSILEKVILR WRRKKTGLRG  780
FRSEKASQKG ALEKEDEYEY LSVGRKQKLA GVEKALARVQ SMVRHPEARD QYMRLVTKFE  840
STKLDDGGAV DRSSPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-135	CAMTA family protein