PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14777.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 403aa MW: 46037.7 Da PI: 9.8721

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.8	3.6e-15	81	140	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a+ k++g PHU14777.1 81 SRFRGVSRHRWTGRYEAHLWDkGSWNVtqkKKgKQVYLGAYDEEESAARAYDLAAIKYWG 140 789****************888855555447***********************98 PP
2	AP2	52.3	1.4e-16	183	234	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g PHU14777.1 183 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 234 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDLNKESYLV KSEMVSSGKR SMSMVDYDIP ETTKRVKRRR RSPPAVAVLN DNIGQQADQQ 60 KMDSSKVDQN IAHTPTVKRS SRFRGVSRHR WTGRYEAHLW DKGSWNVTQK KKGKQVYLGA 120 YDEEESAARA YDLAAIKYWG TSTFINFPIS DYEKEIEIMQ TVTKEEYLAS LRRRSSGFAR 180 GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN 240 FDLSTYIRWL KPGVNTQMAF QELRSENQAI QTNTNDMINP VNDPQFSFGS NYFATTRETL 300 PPIPQSQEPI ERKMPLSPKP SSPTALSLLL RSSMYRELVE KNSNTSASEK DKPNMKNKQQ 360 ANTEDDFVFY TSDKLPALAS MDKGTTSSPL CDRAGQSFWD VMP

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDLNKESYLV KSEMVSSGKR SMSMVDYDIP ETTKRVKRRR RSPPAVAVLN DNIGQQADQQ  60
KMDSSKVDQN IAHTPTVKRS SRFRGVSRHR WTGRYEAHLW DKGSWNVTQK KKGKQVYLGA  120
YDEEESAARA YDLAAIKYWG TSTFINFPIS DYEKEIEIMQ TVTKEEYLAS LRRRSSGFAR  180
GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN  240
FDLSTYIRWL KPGVNTQMAF QELRSENQAI QTNTNDMINP VNDPQFSFGS NYFATTRETL  300
PPIPQSQEPI ERKMPLSPKP SSPTALSLLL RSSMYRELVE KNSNTSASEK DKPNMKNKQQ  360
ANTEDDFVFY TSDKLPALAS MDKGTTSSPL CDRAGQSFWD VMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-94	AP2 family protein