PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU14470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 28323.9 Da PI: 5.0918 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 7.7e-18 | 9 | 59 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykG+r +k +g+Wv+e+r p++ r r++lg+++tae+Aa+a +aa +l+g PHU14470.1 9 PKYKGIRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 59 79******99.*******999833...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MENGGPSQPK YKGIRLRKWG KWVSEVRLPN SRERIWLGSY DTAEKAARAF DAAQFCLRGP 60 KAKFNFPDSP PDISLSDRKR LSPAEIQAIA ARFANDDHSH SQSSSVVQEI RQLPSHGHDY 120 EGNMSNINSH VTNMEKDEMS LSSTTCNDPV VQMDTNNNST ATAAMAWASF DMWEDYPHHA 180 IGPPPDLFCD PHSSYAGTNY DSGYYPAGVL DSLSSNLYSP PHFPQRVTPN YDDDDTGNGG 240 DEHYPQQSFL WNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 3e-42 | ERF family protein |