PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU14428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 398aa MW: 43405.4 Da PI: 5.3783 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33 | 1.4e-10 | 98 | 142 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+ ++++ + +G g+W++Iar +Rt q+ s+ qky PHU14428.1 98 AWTVEEHRSFLRGLAIYGRGDWRSIARNCVITRTSMQVASHAQKY 142 7**************************99989************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MSTDQICNST FWTKEEEKVF ETTLAIYFKG GDLLTKMEEA LPCKSRDDII NHYKILIEDV 60 DAIESGRVPL PNYPELPSHS NQKSRFPKTN LARRKGVAWT VEEHRSFLRG LAIYGRGDWR 120 SIARNCVITR TSMQVASHAQ KYFNRLKAVN KENRRMSIHD ITIVDAEVAG TSQVPYTEGM 180 IWPACGGSQA VACTSNQNML PPESTNAEQM IAVAGGESSG HTAAFGSGMN SMSDEDDFIL 240 HIDDLIVDPE DANESEILVD GGKSLLPSKQ PCTAGSSGSN NHPIFRVGSE LGALITKQMD 300 EDYDFFSIFD DGDAPISHAM VSNAAHSGMT SFAVASNSAN NPPQNTVSAH SGRTSFAAAS 360 TGPNKAPLNM VSDHPQLPHV APSSNCVVGE WLQFKYYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 7e-46 | MYB family protein |