PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU14131.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 275aa    MW: 30561.9 Da    PI: 10.649
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU14131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.11.5e-11109153347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++l +g+W+ I+++    Rt+ q+ s+ qky
       PHU14131.1 109 SWTEEEHRCFLIGLEKLRKGDWRGISKHYVPSRTPTQVASHAQKY 153
                      7***************************999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGSMTKDARK CSHCGHNSRT CNSKGVGGIK LFGVRIDDNY NSNSNNNNHG HGNIKIKMRK  60
IGDYESIRRS KSLGNLEHAA NYDNIGGVEA GYLSDGPIHS LRHRKKGTSW TEEEHRCFLI  120
GLEKLRKGDW RGISKHYVPS RTPTQVASHA QKYFIRMSSI DKKKRRPSVF DVYLKDLNPQ  180
IPSKSSPSVS NMVSEVSKDA SSRVVQLFDT CQIKGQASKG VPCATRERPP LSPSPISRPF  240
GVRNLRHMPY MMGAPPNIHS VTPAKAGPTI SWILP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162166KKKRR
2162167KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.11e-44MYB_related family protein