PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU14078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 167aa MW: 19010.5 Da PI: 9.7165 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.3 | 4.8e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien nrqvtfskRr+g+lKKA+ELSvLCd evaviifsstgkl+e+ss PHU14078.1 9 KLIENVNNRQVTFSKRRAGLLKKASELSVLCDSEVAVIIFSSTGKLFEFSS 59 569**********************************************96 PP | |||||||
2 | K-box | 32.9 | 2.7e-12 | 95 | 145 | 9 | 59 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLe 59 ++++ ++ q+e++ Lk+e+ +L+++q +llG+dL+ + l+eL+ Le+qL+ PHU14078.1 95 QQTHFLKQEQKEVDSLKDELAKLKTKQLRLLGKDLNGMGLNELRLLEHQLN 145 4555568899***************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MGRGKIDIKL IENVNNRQVT FSKRRAGLLK KASELSVLCD SEVAVIIFSS TGKLFEFSST 60 SMKQTLSRYN RCVSSTESSA VEKKPEGNEQ PQSQQQTHFL KQEQKEVDSL KDELAKLKTK 120 QLRLLGKDLN GMGLNELRLL EHQLNXVSSG MYLFVESWKS ELWYSTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 8e-47 | MIKC_MADS family protein |