PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13943.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 324aa    MW: 36658.5 Da    PI: 4.8262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-10141184755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + Er+RR r+++++  Lr+l+P+      +K++Ka+i   A+ Y++ Lq
  PHU13943.1 141 ISERKRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAILYVQGLQ 184
                 67*********************7.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MESANASTIM SMENNVKDVG LINFLDEDNF EQFIEFIRGE TGDPIVKFSP TYDCEYITGC  60
FSTANAQFEP TSMDFNDWNA TSMSDPFSLY TSLPRKMKIH EEDEEEDNDC DESSATMITT  120
TVTPGTPTKK STRTDRSRTL ISERKRRGRM KEKLYALRSL VPNITKMDKA SIIGDAILYV  180
QGLQTKAKIL KVEIADFESS LNRMNNNQGG IFQSAMKTNF TSYFPTIKRI TKMEVIPVEE  240
KGFYVRLVCN KGRQVAASLF KALESLTGFN VQSSNLATSI NDYVLTFTLN ARECEMDRNF  300
SNLKLWIASA FLNQGFDFET SSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-71bHLH family protein