PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU13904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | CAMTA | ||||||||
Protein Properties | Length: 170aa MW: 20051.4 Da PI: 10.0403 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 58.3 | 1.5e-18 | 67 | 131 | 23 | 86 |
CG-1 23 kheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg..vevlycyYa 86 +++ ++ + g ++L+nrk++ryfrkDG++w+ +k gktv+E+ ekL +g e ++c+ + PHU13904.1 67 SFKYRRASMNVVAGGFVFLFNRKVLRYFRKDGHNWR-RKAGKTVKEAQEKLEIGKrsSEFVMCLHV 131 4555567777788999*******************8.679*************9877455555444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MDLFMKHLYL PEDLQRDYYK QLAYLKIEIL RRLCDDVIEA EAIQSTLNKR IMAAKNTDFN 60 QNLKSCSFKY RRASMNVVAG GFVFLFNRKV LRYFRKDGHN WRRKAGKTVK EAQEKLEIGK 120 RSSEFVMCLH VVAVLNCRIR KYNEAIPYLE RSIEIPDLDM GQNLSLAKFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 1e-15 | CAMTA family protein |