PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13406.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 344aa    MW: 38628.6 Da    PI: 10.0026
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84.1e-32277335259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  PHU13406.1 277 SDEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 335
                 69************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEEIEEANNA AVENCHRVMS LLSSGTHDRN QYMNLVRETG EAVNKFKKVV TLLNSTLGHA  60
RVRKSNKFKT PLPHNILVEN PNCKIDDQAK ALRSRPIDEN RVLEMGGTNV KCNLTLGSPS  120
LELSSNSRNP LNFGQQTHLP SYNYLQQQQQ QQRLFLLQQQ QLKQPAEMMY RRSSSGVSLN  180
FDSSTCTPTM SSTRSFISSL SVDGSVANGS NFHLVGASQS LDQSSFQHKR RCSERGDEGS  240
MKCGSSGKCH CSKKRKHRVK RSIKVPAVSN KLADIPSDEY SWRKYGQKPI KGSPHPRGYY  300
KCSSMRGCPA RKHVERCLED PSMLIVTYEG EHNHPRMPSQ SANT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-109WRKY family protein