PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13170.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 340aa MW: 38013.7 Da PI: 8.7008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.8e-53	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ +++ PHU13170.1 16 LPPGFRFHPTDEELVVHYLKKKIASVPLPV-SIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTAgGTQ 113 79**************************.89***********988899***********************************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg+k++W+mheyrl PHU13170.1 114 KVGVKKALVFYGGKPPKGVKSNWIMHEYRL 143 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MESTDSSSGS HQQPQLPPGF RFHPTDEELV VHYLKKKIAS VPLPVSIIAE VDLYKFDPWE 60 LPAKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GVKSNWIMHE YRLAENKANN KPPGCDLANK KSLRLDDWVL CRIYKKSNTQ 180 RPIDHERDDL NIDMMMGSSS INPSCIANNS MSLPNLFGQP KIPQLKSSNF GSALLENDPH 240 LYDQSGSQFS SKRPLANLYW TDQDGAASND NSHQSTKRFL TDNMEEGLNM NVRAADEQNG 300 SIVSLLSQLP QTPSLHQQQV LGSLSDGVFR QPYSGMNWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-109	NAC family protein