PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU13059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 208aa MW: 23353.7 Da PI: 8.7293 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.6 | 9.2e-14 | 35 | 80 | 85 | 128 |
NAM 85 atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 atg dk+++++ +e +glkk+Lv+y+g+a kg+ktdW+mhe+rl PHU13059.1 35 ATGIDKPIYNStaCHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 80 89*******98777778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MRGTSNPSWV WATTPGCGPM RGTSNFLGHD WAQLATGIDK PIYNSTACHE CIGLKKSLVY 60 YRGSAGKGTK TDWMMHEFRL PAENDKSTKH IQAKSIAQEA SLTVYSLYAV AMAVAKVASD 120 VKAGDIKVLF VKPLVYWTRF FIISTAFSRP QSDAIGTRIR DMVEEQYGKV ASGDSKPNSW 180 TLLDFGDVVV HIFLPQQREY YYLEEFYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12910.1 | 3e-20 | NAC family protein |